​​​Histopathology Publications​ 2024​


October-December


  • YAP1::KMT2A-rearranged sarcomas harbor a unique methylation profile and are distinct from sclerosing epithelioid fibrosarcoma and low-grade ​fibromyxoid sarcoma. Warmke LM, Ameline B, Fritchie KJ, Dehner CA, Agaimy A, Din NU, Miettinen MM, Dermawan JK, Gross JM, Thangaiah JJ, Chrisinger JSA, Suster DI, Perret R, Le Loarer F, Charville GW, Buehler D, Yeung MCF, Smith BF, Baumhoer D and Davis JL. ​​​Virchows Arch. 2024 Dec 6. DOI: 10.1007/s00428-024-03995-2​.


  • ​TFE3-rearranged Head and Neck Neoplasms: Twenty-two Cases Spanning the Morphologic Continuum Between Alveolar Soft Part Sarcoma and PEComa and Highlighting Genotypic Diversity. Agaimy A, Michal M, Abdelsatir A, Abdelsatir AA, Abdulrahim S, Laco J, Ihrler S, Tögel L, Stoehr R, Bishop JA, Din NU, Michal M. Am J Surg Pathol. 2024 Nov 27. doi: 10.1097/PAS.0000000000002334. Epub ahead of print. PMID: 39593216. ​DOI: 10.1097/PAS.0000000000002334


  • High grade B-cell lymphoma presenting as gastrointestinal polyposis. Khandwala K, Mushtaq MA, Hilal K and Minhas K. ​BMJ Case Rep. 2024 Nov 13;17(11):e261113. DOI: 10.1136/bcr-2024-261113


  • ​Spinal and posterior mediastinal mature cystic teratoma mimicking neurenteric cyst. Khandwala K, Ali H, Hilal K and Asghari T. BMJ Case Rep. 2024 Nov 5;17(11):e263055. doi: 10.1136/bcr-2024-263055. PMID: 39500583. ​​DOI: 10.1136/bcr-2024-263055

  • ​​Inflammatory myofibroblastic tumor: A rare cause of intestinal obstruction: Case report. Maqbool N, Pal KMB, Uddin Z and Safdar F. ​​Int J Surg Case Rep. 2024 Nov;124:110438. ​DOI: 10.1016/j.ijscr.2024.110438

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  • Factors associated with the survival of oral cavity cancer patients: a single institution experience from Karachi, Pakistan. Shamsi U, Khan MAA, Qadir MS, Rehman SS​​U, Azam I, Idress R. BMC Oral Health. 2024 Nov 22;24(1):1427. ​​​DOI: 10.1186/s12903-024-04920-4


  • ​​​Sensitivity and Predictive Value of the Frozen Section of Sentinel Lymph Node Biopsy in the Post-neoadjuvant Setting: Experience From a Tertiary Care Hospital in a Resource-Limited​​​ Country. Safdar F, Vohra L and Idress R. Cureus. 2024 Oct 26;16(10):e72412. ​DOI: 10.7759/cu​​reus.72412

July-September

  • Medullary Thyroid Carcinoma in the Background of Non-neoplastic Toxic Nodular Goiter. Rizwan A, Saad M, Fatima S, Ameen A, Akh​ter S. AACE Clin Case Rep. 2024 Sep 2;10(6):249-252. DOI: 10.1016/j.aace.2024.08.008


  • Clinicopathological characteristics of extranodal Rosai-Dorfman disease: A retrospective case series of 25 patients. ​Tran PTC, Din NU, Xu Z and Ahsan BU. ​Ann Diagn Pathol. 2024 Sep 27;73:152377. doi: 10.1016/j.anndiagpath.2024.152377. Epub ahead of print. PMID: 39366206. DOI: 10.1016/j.anndiagpath.2024.152377


  • ​​Model for detecting metastatic deposits in lymph nodes of colorectal carcinoma on digital/ non-WSI images. Zehra T, Moeen S, Shams M, Raza M, Khurshid A, Jafri A and Abdul-Ghafar J.​ Diagn Pathol. 2024 Sep 16;19(1):125. ​DOI: 10.1186/s13000-024-01547-5


  • Chromoblastomycosis: A Single Centre Clinical Labora​tory Experience of Seven Years (2016-2022) and Literature Review From Pakistan. Zeeshan M, Fatima S, Farooqi J, Owais R, Ahmed A, Jabeen K, Zafar A.​ Mycoses. 2024 Sep;67(9):e13796. ​DOI: 10.1111/myc.13796


  • A fetus with a mass in the or​al cavit​y: A rare case of large oral immature teratoma. Anjum S, Siddiqui HF and Arshad S.​ SAGE Open Med Case Rep. 2024 Sep 14;12:2050313X241275027. DOI: 10.1177/2050313X241275027


  • Extra-abdominal and intra-abdominal FET::CREM fusion mesenchymal neoplasms: comparative clinicopathological study of 9 new cases further supporting a distinct potentially aggressive sarcoma and report of novel sites.​ Agaimy A, Blakely M, Breimer GE, Hölsken A, Koppes SA, Meidenbauer N, Rijken JA, Schad A, Simon AG, Stoehr R, Bishop JA, and Din NU.​ Virchows Arch. 2024 Sep 9.​DOI: 10.1007/s00428-024-03917-2.​


  • ​Xanthogran​​ulomatous epithelial tumors/keratin-positive giant cell-rich tumors involving the head and neck: report of seven cases and review of the literature. Whaley RD, Agaimy A, Bridge JA, Stoehr R, Din NU, Gagan J, Rampisela D, Folpe AL, and Bishop JA.​ Virchows Arch. 2024 Aug 20. DOI: 10.1007/s00428-024-03892-8


  • ​Accuracy and Comparison of Core Needle Biopsy Diagnoses With Excision Specimen for Diagnosing Fibroepithelial Lesions of the Breast. ​​​Tariq MU, Rani A, Kayani N, Sattar AK, Vohra L, and Idress R​​. Cureus. ​2024 Jul 20;16(7):e64997. ​DOI: 10.7759/cureus.64997


  • ​​Extensive Cytomegalovirus Gastroduodenitis Ca​using Gastric Outlet Obstruction in an Immunocompetent Patient. Jalil Z, Zaman Z, Lund S, Seetlani NK and Arshad S.​ ACG Case Rep J. 2024 Jul 20;11(7):e01420. DOI: 10.14309/crj.0000000000001420.​


  • ​​​Spinal Atypical Teratoid Rhabdoid Tumor in a 14-Year-old Child With Down Syndrome: A Case Report.​​ Zahid S, Bashir F, Minhas K, Anwar SS, Javed G, Hawkins C, Bouffet E and Mushtaq N.​​​​ J Pediatr Hematol Oncol. 2024 Aug 1;46(6):e433-e438. ​​​​DOI: 10.1097/MPH.0000000000002919


  • ​​The current status and challenges of bioethics education in undergraduate medical education in Karachi, Pakistan. Shirazi B, Riaz Q, Jafarey AM, Ahmed R and Shamim MS.​​ MC Med Educ. 2024 Jul 9;24(1):737.​​​​​ ​DOI: 10.1186/s12909-024-05599-5.​

April-June

  • Assessing Morphological Diversity of Acinic Cell Carcinoma of Salivary Glands at a Tertiary Care Hospital in Pakistan​​​​​. Suleman S, Fatima S and Ud Din N.​ ​​Cureus. 2024 Jun 25;16(6):e63134. ​​DOI: 10.7759/cureus.63134.

  • ​​​A Comprehensive Clinicopathologic and Molecular Reappraisal of GLI1-altered Mesenchymal Tumors with Pooled Outcome Analysis Showing Poor Survival in GLI1- amplified Versus GLI1-rearranged Tumors. ​Saoud C, Agaimy A, Dermawan JK, Chen JF, Rosenblum MK, Dickson BC, Dashti N, Michal M, Kosemehmetoglu K, Din NU, Albritton K, Agaram NP and Antonescu CR. ​​Am J Surg Pathol. 2024 Jun 27.​ DOI: 10.1097/PAS.0000000000002272.​


  • Diagnostic utility of anti-thyroid peroxidas​e immunohistochemistry in the identification of papillary thyroid carcinoma. ​​Suleman S, Fatima S and Tariq MU. ​Diagn Pathol. 2024 Jun 25;73:152358. DOI: 10.1016/j.anndiagpath.2024.152358.​


  • ​Duodenal stricture secondary to IgG4-related chronic sclerosing duodenitis-A case report with review of the literature. Anns KM, Salar M, Salar H, Khan F, Memon WA, Aman M, Zafar U, Minhas K, Zafar H, and Shahid J. Clin Case Rep. 202​4 May 27;12(6):e8980. DOI: 10.1002/ccr3.8980


  • A shared group of bacterial taxa in the duodenal microbiota of undernourished Pakistani children with environmental enteric dysfunction. ​​​Iqbal NT, Chen RY, Griffin NW, Hibberd MC, Khalid A, Sadiq K, Jamil Z, Ahmed K, Iqbal J, Hotwani A, Kabir F, Rahman N, Rizvi A, Idress R, Ahmed Z, Ahmed S, Umrani F, Syed S, Moore SR, Ali A, Barratt MJ and Gordon JI.​  mSphere. 2024 Jun 25;9(6):e0019624.​​ DOI: 10.1128/msphere.00196-24



  • ​Pediatric neuropathology practice in a low- and middle-income country: capacity building through institutional twinning.​ ​​Gilani A, Mushtaq N, Shakir M, Altaf A, Siddiq Z, Bouffet E, Tabori U, Hawkins C, and Minhas K. ​​​Front Oncol. 2024 May 3;14:1328374.​​ ​​​DOI: 10.3389/fonc.2024.1328​374


  • Case of embryonal tum​or multilayered rosettes in a patient with neurofibromatosis type 1. Zahid S, Bashir F, Minhas K, Hilal K, and Mushtaq N. Childs Nerv Syst. 2024 May 7. DOI: 10.1007/s00381-024-06442-4


  • ​Myoepi​​thelial tumors of soft tissue and bone in children and young adults: A clinicopathologic study of 40 cases occurring in patients ≤ 21 Years of age.​ Lo​gan SJ, Dehner CA, Alruwaii FI, Din NU, Olson DR, Fritchie KJ, Charville GW, Blessing MM, and Folpe AL.​​ ​Hum Pathol. 2024 May 21;149:10-20.​​​ DOI: 10.1016/j.humpath.2024.05.007.​


  • ​​Differential analysis of histopatho​logical and genetic markers of cancer aggressiveness, and survival difference in EBV-positive and EBV-negative prostate carcinoma. Ahmed K, Sheikh A, Fatima S, Ghulam T, Haider G, Abbas F, Sarria-Santamera A, Ghias K, Mughal N, and Abidi SH​​. Sci Rep. 2024 May 5;14(1):10315. DOI: 10.1038/s41598-024-60538-0.​


  • ​Colorectal Cancer Survival and Its Prognostic Factors in Karachi, Pakistan.​ Shamsi U, Qureshi S, Moosaji M, Azam I, and Idrees R. J Coll Physicians Surg Pak. 2024 Jun;34(6):688-692.​ ​DOI: 10.29271/jcpsp.2024.06.688.​


  • ​Association Between Ki-67 Proliferative Index and Oncotype-Dx Recurrence Score in Hormone Receptor-Positive, HER2-Negative Early Breast Cancers. A Systematic Review of the Literature. Mooghal M, Khan MAA, Samar MR, Shaikh H, Valimohammad AT, Idrees R, Abdul Rashid Y, and Sattar AK. Breast Cancer (Auckl). 2024 May 20;18:11782234241255211. ​​​​DOI: 10.1177/11782234241255211


  • Prevalence of high-risk human papillomavirus in oral squamous cell car​cinoma with or without chewing habits. Anwar N, Chundriger Q, Awan S, Moatter T, Ali TS, Abdul Rasheed M and Pervez S.​ ​​PLoS One. 2024 May 1;19(5):e0300354.​​​ ​DOI: 10.1371/journal.pone.0300354.​

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  • ​Role of​ SOX10 Immunohistochemical Expression in Diagnosing Triple Negative Breast Can​cer and Its Correlation With Clinicopathological Features. Tariq MU, Siddiqui MA, Ud Din N and Kayani N. ​Cureus. 2024 Apr​ 29;16(4):e59276.​ ​DOI: 10.7759/cureus.59276.​​



  • Dermatofibrosarcoma protuberans of the breast. ​​Qadir M, Fatima S, Shaikh S and Zeeshan S.​​​ BMJ Case Rep. 2024 Apr 11;17(4):e258846. ​​DOI: 10.1136/bcr-2023-258846.​


January​​​-March

  • StresSense: Real-Time detection of stress-displaying behavi​ors.​ Saddaf Khan N, Qadir S, Anjum G and Uddin N. ​​Int J Med Inform. 2024 May;185:105401. DOI: 10.1016/j.ijmedinf.2024.105401


  • ​Clinical and biological landscape of constitutional mismatch-repair deficiency syndrome: an International Replication Repair Deficiency Consortium cohort study. Ercan AB, Aronson M, Fernandez NR, Chang Y, Levine A, Liu ZA, Negm L, Edwards M, Bianchi V, Stengs L, Chung J, Al-Battashi A, Reschke A, Lion A, Ahmad A, Lassaletta A, Reddy AT, Al-Darraji AF, Shah AC, Van Damme A, Bendel A, Rashid A, Margol AS, Kelly BL, Pencheva B, Heald B, Lemieux-Anglin B, Crooks B, Koschmann C, Gilpin C, Porter CC, Gass D, Samuel D, Ziegler DS, Blumenthal DT, Kuo DJ, Hamideh D, Basel D, Khuong-Quang DA, Stearns D, Opocher E, Carceller F, Baris Feldman H, Toledano H, Winer I, Scheers I, Fedorakova I, Su JM, Vengoechea J, Sterba J, Knipstein J, Hansford JR, Gonzales-Santos JR, Bhatia K, Bielamowicz KJ, Minhas K, Nichols KE, Cole KA, Penney L, Hjort MA, Sabel M, Gil-da-Costa MJ, Murray MJ, Miller M, Blundell ML, Massimino M, Al-Hussaini M, Al-Jadiry MF, Comito MA, Osborn M, Link MP, Zapotocky M, Ghalibafian M, Shaheen N, Mushtaq N, Waespe N, Hijiya N, Fuentes-Bolanos N, Ahmad O, Chamdine O, Roy P, Pichurin PN, Nyman P, Pearlman R, Auer RC, Sukumaran RK, Kebudi R, Dvir R, Raphael R, Elhasid R, McGee RB, Chami R, Noss R, Tanaka R, Raskin S, Sen S, Lindhorst S, Perreault S, Caspi S, Riaz S, Constantini S, Albert S, Chaleff S, Bielack S, Chiaravalli S, Cramer SL, Roy S, Cahn S, Penna S, Hamid SA, Ghafoor T, Imam U, Larouche V, Magimairajan Issai V, Foulkes WD, Lee YY, Nathan PC, Maruvka YE, Greer MC, Durno C, Shlien A, Ertl-Wagner B, Villani A, Malkin D, Hawkins C, Bouffet E, Das A, Tabori U. ​Lancet Oncol. ​​​DOI: 10.1016/S1470-2045(24)00026-3


  • Management of Breast Intraductal Papilloma Diagnosed on Core Needle Biopsy: Excision or Follow-up?​ Gillani M, Idress R, Afzal S, Khan M, Shahzad H and Sattar AK.​ ​Cureus. 2024 Feb 22;16(2):e54716.​ ​DOI: 10.7759/cureus.54716


  • ​​Immune mapping of human tuberculosis and sarcoidosis lung granulomas.​ ​Carow B, Muliadi V, Skålén K, Yokota C, Kathamuthu GR, Setiabudiawan TP, Lange C, Scheu K, Gaede KI, Goldmann T, Pandita A, Masood KI, Pervez S, Grunewald J, Hasan Z, Levin M and Rottenberg ME.​​ ​Front Immunol. 2024 Feb 7;1​4:1332733.​​ ​​DOI: 10.3389/fimmu.2023.1332733


  • Capacity building for pediatric neuro-oncology in Pakistan- a project by my child matters program of Foundation S.​​ Mushtaq N, Qureshi BM, Javed G, Sheikh NA, Bakhshi SK, Laghari AA, Enam SA, Anwar SSM, Hilal K, Kabir A, Ahmad A, Goraya A, Mistry AS, Rashid A, Maaz AUR, Munawar MA, Khan AA, Bashir F, Hashmi H, Saeed K, Khandwala K, Rehman L, Dewan MC, Khan MS, Karim MU, Shaheen N, Zia N, Yasmeen N, Mahmood R, Memon RAR, Kirmani S, Resham S, Kadri S, Riaz S, Hamid SA, Ghafoor T, Imam U, Mushtaq YR, Rana ZA, Bouffet E, and Minhas K.​​ Front Oncol. 2024 Feb 29;14:1325167. ​​​DOI: 10.3389/fonc.2024.1325167


  • ​Comprehensive clinical overview of malignant pleural mesothelioma. Khan AMH, Anwer SH, Sayed S, Mansha MA, Kamran YB, Khursheed A, Haroon F, Soomro NH, Idrees R and Abbasi AN.  Respir Med. 2024 Feb;222:107511. DOI: 10.1016/j.rmed.2023.107511.


  • ​Recurrent Wnt Pathway and ARID1A Alterations in Sinonasal Olfactory Carcinoma. Rooper LM, Agaimy A, Bell D, Gagan J, Gallia GL, Jo VY, Lewis JS Jr, London NR, Nishino M, Stoehr R, Thompson LDR, Din NU, Wenig BM, Westra WH and Bishop JA. ​Mod Pathol. 2024 Feb 16:100448. DOI: 10.1016/j.modpat.2024.100448.​


  • ​​​Microscopic Colitis in a Young Male: Unveiling the Rarity. ​​​Shahid Y, Sohail Z, Urrehman A and Uddin Z. ​Cureus. 2024 Jan 4;16(1):e51638. DOI: 10.7759/cureus.51638.

  • ​A Curious Case of Primary Gastric Mucosal Melanoma. Sohail Z, Samar MR, Qureshi NJ, Arshad S and Zaki A.​​​ ​Korean J Gastroenterol. 2024 Jan 25;83(1):33-36.​ DOI: 10.4166/kjg.2023.136.